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eln

Professional scientific documentation in org-mode electronic lab notebooks with date-based organization, comprehensive record-keeping of hypotheses, methods, results, reasoning, and outcomes for reproducible research

15stars2forksUpdated 3/3/2026

Security Assessment

Safe(100/100)
Security Score100/100

About eln

The ELN (Electronic Lab Notebook) skill helps researchers maintain organized, reproducible, and professional documentation for their scientific experiments using org-mode. This skill solves the problem of disorganized lab records by promoting a structured approach to document hypotheses, methods, results, and conclusions in a way that ensures reproducibility and clarity. By adhering to best practices in scientific documentation, it helps researchers keep track of their work while ensuring that it can be easily reviewed, reproduced, and verified by others.

Main features of the ELN skill include chronological organization of lab entries, a detailed template for each experiment, and a focus on transparency and reproducibility. The skill enforces a structured directory system for storing research notes, which includes daily logs and directories for storing raw data, results, and analyses. It encourages using detailed entry templates that ensure each part of the scientific process, from hypothesis formation to result analysis, is documented thoroughly. Furthermore, the skill provides tools to keep track of ongoing experiments, such as status markers and links to related work.

This skill is ideal for researchers, students, and professionals involved in scientific research and experiments who require a reliable way to document their work. It is particularly useful for those who need to ensure their research can be reproduced and verified in the future. Target users include scientists, engineers, graduate students, and anyone involved in computational or experimental research who requires clear, organized, and reproducible documentation.

FAQ

How do I create a new entry in my lab notebook?

To create a new entry, follow the provided entry template structure in org-mode, filling in details such as the hypothesis, methods, and results for each experiment. Each entry should be saved in a dated `.org` file under the appropriate date-based directory.

Can I integrate my data files with the ELN?

Yes, the ELN skill supports linking and storing data files such as CSVs, images, and analysis results in the 'data' directories. You can reference these files within your daily entries for easy access.

Is this skill compatible with other scientific documentation tools?

This skill is specifically designed for org-mode and may not be directly compatible with other documentation systems. However, you can export and integrate your org-mode files with other formats if needed.

Can I modify previous entries?

No, past entries should never be deleted or modified. If there is an error or update, make a new entry to clarify or correct the record.

Does this skill support code execution and visualization?

Yes, the ELN skill allows the inclusion of executable code blocks in Python or other languages. You can document the code used for analysis and visualize the results directly in your notebook using org-mode's source code block feature.

All Files

3 files
SKILL.md20.0 KB
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QUICK_REFERENCE.md9.6 KB
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README.md10.3 KB
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Install eln

Download and extract the skill files to your .claude/skills/ directory.

Quick Setup:

  1. Copy the skill folder to .claude/skills/
  2. Claude will automatically detect and use the skill

Repository

jkitchin/skillz