kegg-database
Direct REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion. For Python workflows with multiple databases, prefer bioservices. Use this for direct HTTP/REST work or KEGG-specific control.
Security Assessment
About kegg-database
The kegg-database skill provides direct REST API access to the KEGG (Kyoto Encyclopedia of Genes and Genomes), a vital bioinformatics resource for conducting pathway analysis and studying molecular interaction networks. This skill addresses the challenges researchers face in accessing and utilizing KEGG data efficiently, particularly in academic settings where flexibility and real-time data retrieval are crucial for biological research and analysis. It allows users to easily query various biological data, including pathways, genes, compounds, diseases, and drugs, across multiple organisms using KEGG's REST API, thereby streamlining research workflows and facilitating deeper insights into biological processes.
FAQ
What operations can I perform with the kegg-database skill?
You can perform operations such as retrieving database information, listing entries, searching for specific data, and retrieving complete database entries in various formats.
Is this skill compatible with Python workflows?
Yes, the kegg-database skill is designed for Python environments, providing helper functions for seamless integration with Python workflows.
Are there any usage limitations for the KEGG API?
Yes, the KEGG API is available for academic use only; non-academic use requires a commercial license.
What types of data can I retrieve using this skill?
You can retrieve a variety of data types, including pathway details, gene/protein sequences, compound structures, and pathway maps.
Can I perform searches based on molecular properties?
Yes, the skill supports searches by keywords, chemical formulas, and molecular weights.
Install kegg-database
Quick Setup:
- Copy the skill folder to
.claude/skills/ - Claude will automatically detect and use the skill
Repository
K-Dense-AI/claude-scientific-skills