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dnanexus-integration

DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.

6,195stars743forksUpdated 1/16/2026
Data Science & MLDatabase Management#data-science#genomics#research#cloud-computing#scientific#python-sdk#data-management#bioinformatics#science#dnanexus

Security Assessment

Safe(100/100)
Security Score100/100

About dnanexus-integration

The DNAnexus Integration skill provides a comprehensive suite of tools for developers and researchers working with genomic data on the DNAnexus cloud platform. It simplifies the processes of building and deploying bioinformatics applications and workflows, while also enabling efficient data management, including uploading, downloading, and organizing large datasets. By leveraging the dxpy Python SDK, users can automate their genomic pipeline development and execution, ensuring that complex analyses can be performed efficiently and effectively in a cloud environment.

FAQ

What types of files can I manage using this skill?

You can manage various bioinformatics files, including FASTQ, BAM, and VCF formats.

Do I need a specific account to use this skill?

Yes, a DNAnexus account is required to access and use the features of this skill.

Is there a limit to the size of files I can upload?

File size limitations depend on your DNAnexus account and the specific project settings.

Can I run analyses in parallel using this skill?

Yes, the skill supports parallel processing of jobs and workflows.

Is the DNAnexus Integration skill compatible with other programming languages?

This skill is specifically designed for use with Python through the dxpy SDK.

Install dnanexus-integration

Download and extract the skill files to your .claude/skills/ directory.

Quick Setup:

  1. Copy the skill folder to .claude/skills/
  2. Claude will automatically detect and use the skill

Repository

K-Dense-AI/claude-scientific-skills

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