LogoAwesome Skills
  • Search
  • Category
  • Tag
  • Blog
LogoAwesome Skills
LogoAwesome Skills

Discover Open-Source Agent Skills for AI Coding Assistants

Product

  • Search
  • Category
  • Tag
  • Blog

Resources

  • Claude Skill Docs
  • Antigravity Skills Docs

Tools

  • Claude Code
  • OpenCode
  • Cursor
  • Codex
  • Antigravity

Company

  • Privacy Policy
  • Terms of Service
  • Sitemap

©2026 Awesome Skills. All rights reserved.

Privacy PolicyTerms
Back to Skills

pubmed-database

Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/REST work or custom API implementations.

17,798stars1,609forksUpdated 1/21/2026
#api#data-extraction#biomedical-research#literature-review#pubmed#python

Security Assessment

Safe(100/100)
Security Score100/100

About pubmed-database

The pubmed-database skill provides direct REST API access to the PubMed database, which is the U.S. National Library of Medicine's comprehensive literature repository for MEDLINE and life sciences. This skill addresses the need for researchers and healthcare professionals to efficiently search for biomedical literature, allowing them to construct advanced queries using Boolean operators, MeSH terms, and field tags. By utilizing the E-utilities API, users can automate the retrieval of articles, abstracts, and citation data necessary for systematic reviews and literature analysis.

FAQ

How do I construct complex search queries?

You can use Boolean operators, field tags, and specialized syntax. Refer to the example queries provided for guidance.

Is this skill compatible with Python workflows?

Yes, for Python workflows, it is recommended to use biopython (Bio.Entrez) for easier integration.

What types of publication can I filter by?

You can filter results by publication types such as Clinical Trials, Meta-Analyses, and Systematic Reviews.

Can I access full-text articles through this skill?

Yes, you can retrieve articles marked as free full text by including specific filters in your queries.

Are there any limitations on search queries?

There may be limitations based on the complexity and length of queries; consult the search_syntax.md for more details.

Install pubmed-database

Download and extract the skill files to your .claude/skills/ directory.

Quick Setup:

  1. Copy the skill folder to .claude/skills/
  2. Claude will automatically detect and use the skill

Repository

davila7/claude-code-templates

Related Skills

research

448

secops-detection-engineering

21,346

qdrant-monitoring

259

project-architecture

3