biorxiv-database
Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.
Security Assessment
About biorxiv-database
The biorxiv-database skill serves as an efficient search tool specifically designed for the bioRxiv preprint server. It addresses the need for researchers and professionals in the life sciences to easily locate and access preprints by enabling targeted searches through keywords, authors, date ranges, and subject categories. By providing structured JSON metadata, users can retrieve essential details about preprints, including titles, abstracts, DOIs, and citation information, which are crucial for academic research and literature reviews. Additionally, the skill allows for the downloading of PDFs, facilitating in-depth analysis of the full text of papers.
FAQ
How do I search for preprints using keywords?
You can use the command line to search for preprints by specifying keywords, start and end dates, and output file using the biorxiv_search.py script.
Can I filter results by author?
Yes, you can search for all papers by a specific author within a date range by using the appropriate command in the script.
Is there a limit to the number of preprints I can download?
While there is no explicit limit, downloading multiple PDFs may require scripting to handle batch processing efficiently.
What programming language is required to use this skill?
This skill is implemented in Python, so familiarity with Python is necessary to utilize it effectively.
Are there specific categories I can filter my searches by?
Yes, you can filter searches by various bioRxiv subject categories such as biochemistry, bioinformatics, and genomics.
Install biorxiv-database
Quick Setup:
- Copy the skill folder to
.claude/skills/ - Claude will automatically detect and use the skill
Repository
davila7/claude-code-templates